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Library Construction Chromium™ Controller Firmware Update Procedure FOR USE WITH Chromium™ Controller & Accessory Kit PN-120223 Chromium™ Single Cell Controller & Accessory Kit PN-120263 NOTICES Notices Manual Part Number CG000057 Rev C Legal Notices © 2017 10x Genomics, Inc. All rights reserved. Duplication and/or reproduction of all or any portion of this document without the express written consent of 10x Genomics, Inc., is strictly forbidden. Nothing contained herein shall constitute any warranty, express or implied, as to the performance of any products described herein. Any and all warranties applicable to any products are set forth in the applicable terms and conditions of sale accompanying the purchase of such product. 10x Genomics provides no warranty and hereby disclaims any and all warranties as to the use of any third party products or protocols described herein. The use of products described herein is subject to certain restrictions as set forth in the applicable terms and conditions of sale accompanying the purchase of such product. “10x”, “10x Genomics”, “Changing the Definition of Sequencing”, “Chromium”, “GemCode”, “Loupe”, “Long Ranger”, “Cell Ranger” and “Supernova” are trademarks of 10x Genomics, Inc. All other trademarks are the property of their respective owners. All products and services described herein are intended FOR RESEARCH USE ONLY and NOT FOR USE IN DIAGNOSTIC PROCEDURES. Customer Information and Feedback For technical information or advice, please contact our Customer Technical Support Division online at any time. Email: [email protected] 10x Genomics 7068 Koll Center Parkway Suite 401 Pleasanton, CA 94566 USA _______________________________________________________________________________________________ Chromium™ Controller Firmware Update Procedure • Rev C 1 FIRMWARE UPDATE PROCEDURE 1. Prepare a USB Flash Drive It is possible to jump previously released updates and install only the most recent Firmware Update file. These instructions are also applicable to firmware downgrades, when necessary. These instructions are for preparing a customer provided USB Flash Drive. NOTE If using a 10X Genomics provided Flash Drive skip ahead to step 2. a) Obtain an Empty USB Flash drive (2 GB minimum) that has been formatted for a Fat32 file format. b) If using your own USB Flash Drive, Download the latest Firmware (FW) Update file(s) from the 10x Genomics® support site: support.10xgenomics.com. If using a 10X Genomics provided USB Flash Drive skip ahead to Step 2. c) Move or copy the FW Update file to the top level of the USB Flash drive; do not put them in a folder. d) Ensure no other FW Update files are at the top level of the USB Flash drive. Previous FW Update files may be in folders on the USB Flash drive. e) Safely eject and remove the USB Flash drive from your computer. _______________________________________________________________________________________________ Chromium™ Controller Firmware Update Procedure • Rev C 2 FIRMWARE UPDATE PROCEDURE 2. Initialize the Chromium™ Controller The same instructions apply to the Chromium Single Cell Controller. NOTE a) Ensure the Chromium Controller is positioned in accordance with recommendations in the Chromium Controller Specifications. b) Turn off the Chromium Controller using the power switch on the back of the unit. c) Insert the USB Flash drive into the USB port at the rear of the instrument. d) Turn on the Chromium Controller using the power switch on the back of the unit. e) The Chromium Controller touchscreen will indicate initialization is in progress. f) When initialization is complete, press anywhere on the touchscreen of the Chromium Controller to bring up the Home screen. g) Press the Menu icon (upper right corner) to open the Menu screen. Home screen. Press the Menu icon (upper right corner) to open the Menu screen. h) Press the arrow (>) next to “firmware update” to open the Firmware Update screen. _______________________________________________________________________________________________ Chromium™ Controller Firmware Update Procedure • Rev C 3 FIRMWARE UPDATE PROCEDURE Menu screen. Press the arrow (>) next to “firmware update” to open the Firmware Update screen. 3. Initiate the Firmware Update i) Firmly press the arrow (>) in the Firmware Update screen and the update will begin. Firmware Update screen. Firmly press the arrow (>) and the update will begin. j) A progress bar with the “In Bootloader” message will be visible on the Chromium™ Controller screen. k) The bar will fill left to right as the FW Update loading progresses; The entire upload should be completed within 10 – 15 seconds. When the original Chromium Controller Splash screen appears, the FW Update is complete. l) Turn off the Chromium Controller. _______________________________________________________________________________________________ Chromium™ Controller Firmware Update Procedure • Rev C 4 FIRMWARE UPDATE PROCEDURE m) Remove the USB Flash drive. n) Turn on the Chromium Controller. o) When initialization is complete, press any location on the touchscreen of the Chromium Controller to bring up the Home screen. p) Press the Menu icon (upper right corner) to open the Menu screen. q) Press the arrow (>) next to “device” to open the Device Information screen. r) 4. Verify that the firmware has been updated to the new version. Run the System Readiness Test s) Refer to the appropriate procedure for your system. For Chromium Controller use CG00025 and for Single Cell Chromium Controller use CG00051. _______________________________________________________________________________________________ Chromium™ Controller Firmware Update Procedure • Rev C 5